Hydrogen bonding interaction of the amide group of Asn and Gln at distal E7 of bovine myoglobin with bound-ligand and its functional consequences
Biochimica et Biophysica Acta (BBA) - Protein Structure and Molecular Enzymology, ISSN: 0167-4838, Vol: 1433, Issue: 1, Page: 27-44
1999
- 6Citations
- 3Captures
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- Citations6
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- Captures3
- Readers3
Article Description
Asn and Gln with an amide group at γ- and δ-positions, respectively, were substituted for distal His-E7 of bovine myoglobin to establish a system where hydrogen bonding interaction between the distal residue and bound-ligand can be altered by changing donor–acceptor distance. Two mutant myoglobins showed nearly identical 1 H-NMR spectral pattern for resolved heme peripheral side-chain and amino acid proton signals and similar two-dimensional NMR connectivities irrespective of cyanide-bound and -unbound states, indicating that the heme electronic structure and the molecular structure of the active site are not affected by a difference in one methylene group at the E7 position. Chemical exchange rate of Asn-E7 N δ H proton in met-cyano myoglobin is larger than that of Gln-E7 N ϵ H proton by at least two orders of magnitude, suggesting a considerable difference in the strength of hydrogen bond between the E7 side-chain and bound-ligand, due to the differential donor–acceptor distance between the two mutants. Thus a comparative study between the two proteins provides an ideal system to delineate a relationship between the stabilization of bound-ligand by the hydrogen bond and myoglobin’s ligand affinity. The Asn-mutant showed a faster dissociation of cyano ion from met-myoglobin than the Gln-mutant by over 30-fold. Similarly, oxygen dissociation is faster in the Asn-mutant than in the Gln-mutant by ∼100-fold. Association of cyanide anion to the mutant met-myoglobin was accelerated by changing Gln to Asn by a 4-fold. Likewise, oxygen binding was accelerated by ∼2-fold by the above substitution. The present findings confirm that hydrogen bonding with the distal residue is a dominant factor for determining the ligand dissociation rate, whereas steric hindrance exerted by the distal residue is a primary determinant for the ligand association.
Bibliographic Details
http://www.sciencedirect.com/science/article/pii/S0167483899001259; http://dx.doi.org/10.1016/s0167-4838(99)00125-9; http://www.scopus.com/inward/record.url?partnerID=HzOxMe3b&scp=0032774793&origin=inward; http://www.ncbi.nlm.nih.gov/pubmed/10446357; https://linkinghub.elsevier.com/retrieve/pii/S0167483899001259; http://linkinghub.elsevier.com/retrieve/pii/S0167483899001259; http://api.elsevier.com/content/article/PII:S0167483899001259?httpAccept=text/xml; http://api.elsevier.com/content/article/PII:S0167483899001259?httpAccept=text/plain; http://dx.doi.org/10.1016/s0167-4838%2899%2900125-9; https://dx.doi.org/10.1016/s0167-4838%2899%2900125-9
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