Gonad transcriptome of discus fish (Symphysodon haraldi) and discovery of sex-related genes
Aquaculture Research, ISSN: 1365-2109, Vol: 48, Issue: 12, Page: 5993-6000
2017
- 13Citations
- 20Captures
Metric Options: Counts1 Year3 YearSelecting the 1-year or 3-year option will change the metrics count to percentiles, illustrating how an article or review compares to other articles or reviews within the selected time period in the same journal. Selecting the 1-year option compares the metrics against other articles/reviews that were also published in the same calendar year. Selecting the 3-year option compares the metrics against other articles/reviews that were also published in the same calendar year plus the two years prior.
Example: if you select the 1-year option for an article published in 2019 and a metric category shows 90%, that means that the article or review is performing better than 90% of the other articles/reviews published in that journal in 2019. If you select the 3-year option for the same article published in 2019 and the metric category shows 90%, that means that the article or review is performing better than 90% of the other articles/reviews published in that journal in 2019, 2018 and 2017.
Citation Benchmarking is provided by Scopus and SciVal and is different from the metrics context provided by PlumX Metrics.
Example: if you select the 1-year option for an article published in 2019 and a metric category shows 90%, that means that the article or review is performing better than 90% of the other articles/reviews published in that journal in 2019. If you select the 3-year option for the same article published in 2019 and the metric category shows 90%, that means that the article or review is performing better than 90% of the other articles/reviews published in that journal in 2019, 2018 and 2017.
Citation Benchmarking is provided by Scopus and SciVal and is different from the metrics context provided by PlumX Metrics.
Article Description
Discus fish (Symphysodon haraldi) is a well-known and economical ornamental fish. In this study, RNA-seq technology was applied to de novo assemble a gonad transcriptome of discus fish, and to discover sex-related genes. Assembly of these reads generated 115,050 transcripts, corresponding to 97,074 non-redundant unigenes, with an average length of 748 bp and N50 length of 1,531 bp. A total of 14,073 unique proteins were assigned at least one Gene Ontology (GO) category and 52,764 unigenes involved in 345 predicted KEGG metabolic pathways were identified. More importantly, about 12 candidate genes involved in sex determination were identified. Furthermore, 10,571 single nucleotide polymorphisms and 26,083 simple sequence repeats were also detected. The results of the present study can provide basic information for examining the potential roles of sex-related genes in the sex determination of discus fish.
Bibliographic Details
Provide Feedback
Have ideas for a new metric? Would you like to see something else here?Let us know