Automated eukaryotic gene structure annotation using EVidenceModeler and the Program to Assemble Spliced Alignments
Genome Biology, ISSN: 1474-7596, Vol: 9, Issue: 1, Page: R7
2008
- 2,585Citations
- 911Captures
- 8Mentions
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Example: if you select the 1-year option for an article published in 2019 and a metric category shows 90%, that means that the article or review is performing better than 90% of the other articles/reviews published in that journal in 2019. If you select the 3-year option for the same article published in 2019 and the metric category shows 90%, that means that the article or review is performing better than 90% of the other articles/reviews published in that journal in 2019, 2018 and 2017.
Citation Benchmarking is provided by Scopus and SciVal and is different from the metrics context provided by PlumX Metrics.
Metrics Details
- Citations2,585
- Citation Indexes2,584
- CrossRef2,584
- 2,196
- 1,552
- Patent Family Citations1
- Patent Families1
- Captures911
- Readers911
- 911
- Mentions8
- News Mentions6
- News6
- References2
- Wikipedia2
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Article Description
EVidenceModeler (EVM) is presented as an automated eukaryotic gene structure annotation tool that reports eukaryotic gene structures as a weighted consensus of all available evidence. EVM, when combined with the Program to Assemble Spliced Alignments (PASA), yields a comprehensive, configurable annotation system that predicts protein-coding genes and alternatively spliced isoforms. Our experiments on both rice and human genome sequences demonstrate that EVM produces automated gene structure annotation approaching the quality of manual curation. © 2008 Haas et al.; licensee BioMed Central Ltd.
Bibliographic Details
http://www.scopus.com/inward/record.url?partnerID=HzOxMe3b&scp=42949086676&origin=inward; http://dx.doi.org/10.1186/gb-2008-9-1-r7; http://www.ncbi.nlm.nih.gov/pubmed/18190707; https://genomebiology.biomedcentral.com/articles/10.1186/gb-2008-9-1-r7; https://dx.doi.org/10.1186/gb-2008-9-1-r7; http://genomebiology.biomedcentral.com/articles/10.1186/gb-2008-9-1-r7; https://genomebiology.biomedcentral.com/counter/pdf/10.1186/gb-2008-9-1-r7; http://genomebiology.com/2008/9/1/R7; https://genomebiology.biomedcentral.com/track/pdf/10.1186/gb-2008-9-1-r7; http://europepmc.org/abstract/med/18190707; http://europepmc.org/articles/PMC2395244; http://www.genomebiology.com/2008/9/1/R7
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