Construction of a large collection of small genome variations in French dairy and beef breeds using whole-genome sequences
Genetics Selection Evolution, ISSN: 1297-9686, Vol: 48, Issue: 1, Page: 1-10
2016
- 13Citations
- 28Captures
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Example: if you select the 1-year option for an article published in 2019 and a metric category shows 90%, that means that the article or review is performing better than 90% of the other articles/reviews published in that journal in 2019. If you select the 3-year option for the same article published in 2019 and the metric category shows 90%, that means that the article or review is performing better than 90% of the other articles/reviews published in that journal in 2019, 2018 and 2017.
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Metrics Details
- Citations13
- Citation Indexes13
- 13
- CrossRef10
- Captures28
- Readers28
- 28
Article Description
Background: In recent years, several bovine genome sequencing projects were carried out with the aim of developing genomic tools to improve dairy and beef production efficiency and sustainability. Results: In this study, we describe the first French cattle genome variation dataset obtained by sequencing 274 whole genomes representing several major dairy and beef breeds. This dataset contains over 28 million single nucleotide polymorphisms (SNPs) and small insertions and deletions. Comparisons between sequencing results and SNP array genotypes revealed a very high genotype concordance rate, which indicates the good quality of our data. Conclusions: To our knowledge, this is the first large-scale catalog of small genomic variations in French dairy and beef cattle. This resource will contribute to the study of gene functions and population structure and also help to improve traits through genotype-guided selection.
Bibliographic Details
http://www.scopus.com/inward/record.url?partnerID=HzOxMe3b&scp=84995436795&origin=inward; http://dx.doi.org/10.1186/s12711-016-0268-z; http://www.ncbi.nlm.nih.gov/pubmed/27846802; http://gsejournal.biomedcentral.com/articles/10.1186/s12711-016-0268-z; https://dx.doi.org/10.1186/s12711-016-0268-z; https://gsejournal.biomedcentral.com/articles/10.1186/s12711-016-0268-z
Springer Science and Business Media LLC
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